Welcome to IntrAnat’s documentation!¶
Contents:
IntrAnat is a free database and visualization software for Intracranial Electroencephalographic (iEEG) data that allows to locate and register intracerebral electrodes for individual cases as well as for group studies
IntrAnat is for research purpose only, not medical usage. It is provided “as is,” Inserm and its collaborators do not assume any liability or responsibility for its use.
IntrAnat Electrodes is based on Brainvisa 5.0 (older versions can be used with brainvisa 4.6) (http://brainvisa.info/ ). It uses some of brainvisa’s toolbox such as morphologist (http://brainvisa.info/web/morphologist.html ) and cortical surface analysis (http://brainvisa.info/web/cortical_surface.html ).
It’s also using ANTs (http://stnava.github.io/ANTs/ ) and SPM (http://www.fil.ion.ucl.ac.uk/spm/software/spm12/ ) for multimodality coregistration and estimation of the deformation field (« patient space » to « MNI space »).
Software presentation: https://f-tract.eu/software/intranat
Latest developments: https://github.com/ftadel/IntrAnat/tree/brainvisa_5.0.0dev
Installation instructions: :ref: IntranatInstallationBrainVisa5 Older installation instructions (Brainvisa 4.6): https://github.com/ftadel/IntrAnat/wiki/Installation
User documentation: https://github.com/IntrAnatSEEGSoftware/IntrAnat/blob/brainvisa_4.6/doc/user_documentation.pdf
Cite publication¶
Please cite this article when using IntrAnat:
https://doi.org/10.3389/fninf.2018.00040
IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies
Pierre Deman, Manik Bhattacharjee, François Tadel, Anne-Sophie Job, Denis Rivière, Yann Cointepas, Philippe Kahane and Olivier David